Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccl1P10146 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl1P10146 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccl1P10146 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ccl1P10146 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccl1P10146 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.74□□□□□ -0.21
Ccl1P10146 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl1P10146 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ccl1P10146 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl1P10146 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl1P10146 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl1P10146 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.74□□□□□ -0.21
Ccl1P10146 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl1P10146 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccl1P10146 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl1P10146 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl1P10146 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.73□□□□□ -0.21
Ccl1P10146 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.73□□□□□ -0.21
Ccl1P10146 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.73□□□□□ -0.21
Ccl1P10146 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.73□□□□□ -0.21
Ccl1P10146 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccl1P10146 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.73□□□□□ -0.21
Ccl1P10146 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.73□□□□□ -0.21
Ccl1P10146 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.73□□□□□ -0.21
Ccl1P10146 Spcs1-204ENSMUST00000226782 949 ntBASIC13.73□□□□□ -0.21
Ccl1P10146 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ccl1P10146 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.73□□□□□ -0.21
Ccl1P10146 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccl1P10146 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Ccl1P10146 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl1P10146 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ccl1P10146 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccl1P10146 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccl1P10146 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.72□□□□□ -0.21
Ccl1P10146 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Ccl1P10146 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.72□□□□□ -0.21
Ccl1P10146 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.72□□□□□ -0.21
Ccl1P10146 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl1P10146 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl1P10146 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl1P10146 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccl1P10146 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl1P10146 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl1P10146 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Ccl1P10146 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl1P10146 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl1P10146 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl1P10146 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl1P10146 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccl1P10146 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.71□□□□□ -0.21
Ccl1P10146 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl1P10146 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl1P10146 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl1P10146 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.71□□□□□ -0.21
Ccl1P10146 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.71□□□□□ -0.21
Ccl1P10146 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Ccl1P10146 Gm9959-201ENSMUST00000068277 390 ntBASIC13.71□□□□□ -0.21
Ccl1P10146 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl1P10146 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms