Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.16■□□□□ 0.02
P04946 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.16■□□□□ 0.02
P04946 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
P04946 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.16■□□□□ 0.02
P04946 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
P04946 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04946 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04946 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04946 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04946 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
P04946 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
P04946 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
P04946 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04946 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04946 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
P04946 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.15■□□□□ 0.02
P04946 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04946 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04946 Gm7977-201ENSMUST00000193787 748 ntBASIC15.15■□□□□ 0.02
P04946 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.15■□□□□ 0.02
P04946 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04946 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
P04946 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04946 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04946 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04946 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Gm10231-201ENSMUST00000181584 441 ntBASIC15.14■□□□□ 0.01
P04946 Gm7889-201ENSMUST00000185591 958 ntBASIC15.14■□□□□ 0.01
P04946 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.14■□□□□ 0.01
P04946 Gm10175-202ENSMUST00000208752 441 ntBASIC15.14■□□□□ 0.01
P04946 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04946 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
P04946 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
P04946 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
P04946 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
P04946 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
P04946 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.13■□□□□ 0.01
P04946 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.13■□□□□ 0.01
P04946 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.13■□□□□ 0.01
P04946 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
P04946 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
P04946 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04946 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04946 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04946 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04946 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04946 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04946 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04946 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04946 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04946 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04946 Gm7638-201ENSMUST00000121348 967 ntBASIC15.12■□□□□ 0.01
P04946 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.12■□□□□ 0.01
P04946 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04946 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.12■□□□□ 0.01
P04946 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.12■□□□□ 0.01
P04946 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
P04946 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.12■□□□□ 0.01
P04946 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04946 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms