Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
IghmP01872 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IghmP01872 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IghmP01872 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
IghmP01872 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
IghmP01872 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.54■□□□□ 0.24
IghmP01872 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.54■□□□□ 0.24
IghmP01872 Gm37179-201ENSMUST00000194862 823 ntBASIC16.54■□□□□ 0.24
IghmP01872 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
IghmP01872 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
IghmP01872 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
IghmP01872 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
IghmP01872 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.53■□□□□ 0.24
IghmP01872 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 Gm13401-201ENSMUST00000117074 291 ntBASIC16.53■□□□□ 0.24
IghmP01872 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
IghmP01872 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
IghmP01872 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
IghmP01872 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
IghmP01872 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.53■□□□□ 0.24
IghmP01872 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IghmP01872 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.52■□□□□ 0.24
IghmP01872 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IghmP01872 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IghmP01872 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IghmP01872 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
IghmP01872 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
IghmP01872 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
IghmP01872 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
IghmP01872 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.52■□□□□ 0.24
IghmP01872 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IghmP01872 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
IghmP01872 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IghmP01872 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
IghmP01872 Mtag2-201ENSMUST00000058665 714 ntBASIC16.52■□□□□ 0.24
IghmP01872 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
IghmP01872 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
IghmP01872 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
IghmP01872 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.51■□□□□ 0.23
IghmP01872 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.51■□□□□ 0.23
IghmP01872 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IghmP01872 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
IghmP01872 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IghmP01872 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.51■□□□□ 0.23
IghmP01872 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IghmP01872 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
IghmP01872 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
IghmP01872 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.5■□□□□ 0.23
IghmP01872 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.5■□□□□ 0.23
IghmP01872 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.5■□□□□ 0.23
IghmP01872 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IghmP01872 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms