Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TcraP01849 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TcraP01849 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TcraP01849 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.91□□□□□ -0.34
TcraP01849 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TcraP01849 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.91□□□□□ -0.34
TcraP01849 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TcraP01849 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TcraP01849 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.9□□□□□ -0.34
TcraP01849 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TcraP01849 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TcraP01849 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TcraP01849 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TcraP01849 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TcraP01849 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TcraP01849 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.89□□□□□ -0.35
TcraP01849 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.89□□□□□ -0.35
TcraP01849 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TcraP01849 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.89□□□□□ -0.35
TcraP01849 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.89□□□□□ -0.35
TcraP01849 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TcraP01849 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TcraP01849 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.89□□□□□ -0.35
TcraP01849 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TcraP01849 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TcraP01849 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TcraP01849 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TcraP01849 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TcraP01849 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.88□□□□□ -0.35
TcraP01849 Spcs1-204ENSMUST00000226782 949 ntBASIC12.88□□□□□ -0.35
TcraP01849 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms