Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01788 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01788 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01788 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01788 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.96□□□□□ -0.17
P01788 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01788 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P01788 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
P01788 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
P01788 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01788 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01788 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P01788 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
P01788 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
P01788 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
P01788 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
P01788 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.95□□□□□ -0.18
P01788 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.95□□□□□ -0.18
P01788 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
P01788 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.95□□□□□ -0.18
P01788 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
P01788 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.95□□□□□ -0.18
P01788 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.95□□□□□ -0.18
P01788 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.95□□□□□ -0.18
P01788 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
P01788 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01788 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.94□□□□□ -0.18
P01788 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01788 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
P01788 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.94□□□□□ -0.18
P01788 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01788 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P01788 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
P01788 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.94□□□□□ -0.18
P01788 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01788 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01788 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.94□□□□□ -0.18
P01788 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01788 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01788 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01788 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P01788 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
P01788 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.94□□□□□ -0.18
P01788 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01788 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01788 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.94□□□□□ -0.18
P01788 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
P01788 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01788 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
P01788 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01788 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01788 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01788 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
P01788 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01788 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01788 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01788 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01788 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.93□□□□□ -0.18
P01788 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01788 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01788 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01788 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01788 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01788 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01788 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01788 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P01788 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.92□□□□□ -0.18
P01788 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
P01788 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
P01788 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
P01788 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.92□□□□□ -0.18
P01788 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01788 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P01788 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01788 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01788 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01788 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01788 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01788 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P01788 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.91□□□□□ -0.18
P01788 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01788 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
P01788 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P01788 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.91□□□□□ -0.18
P01788 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P01788 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.91□□□□□ -0.18
P01788 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.91□□□□□ -0.18
P01788 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms