Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.48□□□□□ -0.41
Sh2d1aO88890 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.47□□□□□ -0.41
Sh2d1aO88890 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Gm6211-202ENSMUST00000167849 925 ntBASIC12.47□□□□□ -0.41
Sh2d1aO88890 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Sh2d1aO88890 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.46□□□□□ -0.41
Sh2d1aO88890 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.46□□□□□ -0.41
Sh2d1aO88890 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Mir5133-201ENSMUST00000174955 77 ntBASIC12.46□□□□□ -0.41
Sh2d1aO88890 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sh2d1aO88890 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh2d1aO88890 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sh2d1aO88890 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh2d1aO88890 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh2d1aO88890 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh2d1aO88890 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.46□□□□□ -0.42
Sh2d1aO88890 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sh2d1aO88890 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.46□□□□□ -0.42
Sh2d1aO88890 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.46□□□□□ -0.42
Sh2d1aO88890 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Gm7290-201ENSMUST00000104990 617 ntBASIC12.45□□□□□ -0.42
Sh2d1aO88890 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Gm12918-201ENSMUST00000120234 636 ntBASIC12.45□□□□□ -0.42
Sh2d1aO88890 Gm15710-201ENSMUST00000121821 636 ntBASIC12.45□□□□□ -0.42
Sh2d1aO88890 Gm5075-201ENSMUST00000196916 622 ntBASIC12.45□□□□□ -0.42
Sh2d1aO88890 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.45□□□□□ -0.42
Sh2d1aO88890 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.45□□□□□ -0.42
Sh2d1aO88890 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms