Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.98■□□□□ 0.31
Best1O88870 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.98■□□□□ 0.31
Best1O88870 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.98■□□□□ 0.31
Best1O88870 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.98■□□□□ 0.31
Best1O88870 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Best1O88870 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Best1O88870 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.98■□□□□ 0.31
Best1O88870 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Best1O88870 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.97■□□□□ 0.31
Best1O88870 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.97■□□□□ 0.31
Best1O88870 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Best1O88870 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Best1O88870 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Best1O88870 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Best1O88870 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.96■□□□□ 0.31
Best1O88870 Gm10231-201ENSMUST00000181584 441 ntBASIC16.96■□□□□ 0.31
Best1O88870 Gm7889-201ENSMUST00000185591 958 ntBASIC16.96■□□□□ 0.31
Best1O88870 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Gm10175-202ENSMUST00000208752 441 ntBASIC16.96■□□□□ 0.31
Best1O88870 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Best1O88870 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Best1O88870 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Best1O88870 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Best1O88870 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Best1O88870 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Best1O88870 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Best1O88870 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Best1O88870 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Best1O88870 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.94■□□□□ 0.3
Best1O88870 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Best1O88870 Gm2274-201ENSMUST00000184539 609 ntBASIC16.94■□□□□ 0.3
Best1O88870 Gm9731-201ENSMUST00000209480 747 ntBASIC16.94■□□□□ 0.3
Best1O88870 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.94■□□□□ 0.3
Best1O88870 Il3ra-202ENSMUST00000223589 738 ntBASIC16.94■□□□□ 0.3
Best1O88870 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Best1O88870 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Best1O88870 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Best1O88870 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Best1O88870 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Best1O88870 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Best1O88870 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Best1O88870 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Best1O88870 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Best1O88870 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Best1O88870 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.93■□□□□ 0.3
Best1O88870 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.93■□□□□ 0.3
Best1O88870 Gm17661-201ENSMUST00000170317 270 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms