Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hcn1O88704 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Hcn1O88704 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn1O88704 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn1O88704 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.9■□□□□ 0.3
Hcn1O88704 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn1O88704 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn1O88704 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Hcn1O88704 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hcn1O88704 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn1O88704 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Hcn1O88704 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn1O88704 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hcn1O88704 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn1O88704 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn1O88704 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn1O88704 Gm10653-202ENSMUST00000139570 835 ntBASIC16.89■□□□□ 0.29
Hcn1O88704 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Hcn1O88704 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn1O88704 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn1O88704 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.89■□□□□ 0.29
Hcn1O88704 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.89■□□□□ 0.29
Hcn1O88704 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn1O88704 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn1O88704 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn1O88704 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hcn1O88704 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn1O88704 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.89■□□□□ 0.29
Hcn1O88704 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Hcn1O88704 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Hcn1O88704 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.88■□□□□ 0.29
Hcn1O88704 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Hcn1O88704 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.88■□□□□ 0.29
Hcn1O88704 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn1O88704 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn1O88704 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.87■□□□□ 0.29
Hcn1O88704 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn1O88704 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn1O88704 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn1O88704 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.87■□□□□ 0.29
Hcn1O88704 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn1O88704 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Hcn1O88704 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn1O88704 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hcn1O88704 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn1O88704 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.87■□□□□ 0.29
Hcn1O88704 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn1O88704 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hcn1O88704 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.86■□□□□ 0.29
Hcn1O88704 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.86■□□□□ 0.29
Hcn1O88704 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn1O88704 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hcn1O88704 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn1O88704 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.86■□□□□ 0.29
Hcn1O88704 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Hcn1O88704 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.86■□□□□ 0.29
Hcn1O88704 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.86■□□□□ 0.29
Hcn1O88704 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn1O88704 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn1O88704 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn1O88704 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn1O88704 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn1O88704 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn1O88704 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn1O88704 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn1O88704 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Hcn1O88704 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.85■□□□□ 0.29
Hcn1O88704 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hcn1O88704 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.85■□□□□ 0.29
Hcn1O88704 Gm2559-201ENSMUST00000201323 363 ntBASIC16.85■□□□□ 0.29
Hcn1O88704 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.85■□□□□ 0.29
Hcn1O88704 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn1O88704 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn1O88704 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms