Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClppO88696 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClppO88696 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClppO88696 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClppO88696 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClppO88696 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClppO88696 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClppO88696 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.15■□□□□ 0.34
ClppO88696 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ClppO88696 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ClppO88696 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.14■□□□□ 0.33
ClppO88696 Gm13836-201ENSMUST00000121159 501 ntBASIC17.14■□□□□ 0.33
ClppO88696 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.14■□□□□ 0.33
ClppO88696 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ClppO88696 Mir6349-201ENSMUST00000184059 97 ntBASIC17.14■□□□□ 0.33
ClppO88696 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClppO88696 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.14■□□□□ 0.33
ClppO88696 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ClppO88696 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.13■□□□□ 0.33
ClppO88696 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.13■□□□□ 0.33
ClppO88696 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.13■□□□□ 0.33
ClppO88696 Gm15375-201ENSMUST00000119510 849 ntBASIC17.13■□□□□ 0.33
ClppO88696 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ClppO88696 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ClppO88696 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.13■□□□□ 0.33
ClppO88696 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ClppO88696 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ClppO88696 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.12■□□□□ 0.33
ClppO88696 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClppO88696 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.12■□□□□ 0.33
ClppO88696 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ClppO88696 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClppO88696 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.12■□□□□ 0.33
ClppO88696 Gm7977-201ENSMUST00000193787 748 ntBASIC17.12■□□□□ 0.33
ClppO88696 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.12■□□□□ 0.33
ClppO88696 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.12■□□□□ 0.33
ClppO88696 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClppO88696 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ClppO88696 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClppO88696 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClppO88696 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
ClppO88696 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClppO88696 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClppO88696 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.11■□□□□ 0.33
ClppO88696 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ClppO88696 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClppO88696 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ClppO88696 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ClppO88696 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.11■□□□□ 0.33
ClppO88696 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClppO88696 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.11■□□□□ 0.33
ClppO88696 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClppO88696 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ClppO88696 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClppO88696 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClppO88696 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClppO88696 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.1■□□□□ 0.33
ClppO88696 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ClppO88696 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ClppO88696 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ClppO88696 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ClppO88696 Mir5122-201ENSMUST00000175004 89 ntBASIC17.1■□□□□ 0.33
ClppO88696 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ClppO88696 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.1■□□□□ 0.33
ClppO88696 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms