Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Cops4O88544 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.31■□□□□ 0.2
Cops4O88544 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.31■□□□□ 0.2
Cops4O88544 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops4O88544 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cops4O88544 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cops4O88544 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cops4O88544 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.3■□□□□ 0.2
Cops4O88544 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Cops4O88544 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cops4O88544 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Cops4O88544 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops4O88544 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.29■□□□□ 0.2
Cops4O88544 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.29■□□□□ 0.2
Cops4O88544 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.29■□□□□ 0.2
Cops4O88544 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.29■□□□□ 0.2
Cops4O88544 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.29■□□□□ 0.2
Cops4O88544 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.29■□□□□ 0.2
Cops4O88544 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cops4O88544 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.29■□□□□ 0.2
Cops4O88544 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops4O88544 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.29■□□□□ 0.2
Cops4O88544 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.28■□□□□ 0.2
Cops4O88544 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops4O88544 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops4O88544 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cops4O88544 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops4O88544 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops4O88544 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cops4O88544 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.28■□□□□ 0.2
Cops4O88544 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cops4O88544 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
Cops4O88544 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.28■□□□□ 0.2
Cops4O88544 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Cops4O88544 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops4O88544 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops4O88544 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.28■□□□□ 0.2
Cops4O88544 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cops4O88544 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cops4O88544 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cops4O88544 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cops4O88544 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops4O88544 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cops4O88544 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cops4O88544 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops4O88544 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops4O88544 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops4O88544 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cops4O88544 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cops4O88544 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Cops4O88544 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops4O88544 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cops4O88544 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cops4O88544 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cops4O88544 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cops4O88544 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cops4O88544 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cops4O88544 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cops4O88544 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cops4O88544 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.26■□□□□ 0.19
Cops4O88544 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cops4O88544 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.26■□□□□ 0.19
Cops4O88544 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms