Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.31■□□□□ 0.2
Capns1O88456 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Capns1O88456 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.31■□□□□ 0.2
Capns1O88456 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.31■□□□□ 0.2
Capns1O88456 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 Gm4968-201ENSMUST00000071458 858 ntBASIC16.31■□□□□ 0.2
Capns1O88456 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.31■□□□□ 0.2
Capns1O88456 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Capns1O88456 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Capns1O88456 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.31■□□□□ 0.2
Capns1O88456 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Capns1O88456 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Capns1O88456 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Gm20760-201ENSMUST00000179197 648 ntBASIC16.3■□□□□ 0.2
Capns1O88456 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Capns1O88456 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Capns1O88456 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Capns1O88456 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.3■□□□□ 0.2
Capns1O88456 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Capns1O88456 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capns1O88456 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capns1O88456 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Capns1O88456 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.29■□□□□ 0.2
Capns1O88456 Reep4-203ENSMUST00000226563 1444 ntBASIC16.29■□□□□ 0.2
Capns1O88456 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Capns1O88456 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capns1O88456 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capns1O88456 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Capns1O88456 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.29■□□□□ 0.2
Capns1O88456 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Capns1O88456 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capns1O88456 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Capns1O88456 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capns1O88456 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capns1O88456 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capns1O88456 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Capns1O88456 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Capns1O88456 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Capns1O88456 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Capns1O88456 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Capns1O88456 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Capns1O88456 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.28■□□□□ 0.2
Capns1O88456 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Capns1O88456 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Capns1O88456 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Capns1O88456 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Capns1O88456 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 Gm7514-201ENSMUST00000209475 934 ntBASIC16.27■□□□□ 0.2
Capns1O88456 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.27■□□□□ 0.2
Capns1O88456 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.27■□□□□ 0.2
Capns1O88456 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Capns1O88456 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Capns1O88456 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Capns1O88456 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Capns1O88456 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Capns1O88456 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Capns1O88456 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Capns1O88456 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms