Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tulp3O88413 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tulp3O88413 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tulp3O88413 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.5■□□□□ 0.23
Tulp3O88413 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tulp3O88413 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tulp3O88413 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tulp3O88413 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tulp3O88413 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tulp3O88413 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tulp3O88413 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tulp3O88413 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.49■□□□□ 0.23
Tulp3O88413 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Tulp3O88413 Gm13234-201ENSMUST00000120010 747 ntBASIC16.49■□□□□ 0.23
Tulp3O88413 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.49■□□□□ 0.23
Tulp3O88413 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Tulp3O88413 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.49■□□□□ 0.23
Tulp3O88413 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tulp3O88413 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Tulp3O88413 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Tulp3O88413 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
Tulp3O88413 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tulp3O88413 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.48■□□□□ 0.23
Tulp3O88413 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Tulp3O88413 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.48■□□□□ 0.23
Tulp3O88413 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tulp3O88413 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.47■□□□□ 0.23
Tulp3O88413 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tulp3O88413 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tulp3O88413 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tulp3O88413 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tulp3O88413 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tulp3O88413 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Tulp3O88413 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.47■□□□□ 0.23
Tulp3O88413 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tulp3O88413 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tulp3O88413 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tulp3O88413 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tulp3O88413 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tulp3O88413 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tulp3O88413 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.46■□□□□ 0.23
Tulp3O88413 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Tulp3O88413 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Tulp3O88413 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tulp3O88413 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tulp3O88413 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Tulp3O88413 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.46■□□□□ 0.23
Tulp3O88413 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tulp3O88413 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.46■□□□□ 0.23
Tulp3O88413 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Tulp3O88413 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tulp3O88413 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.46■□□□□ 0.23
Tulp3O88413 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.46■□□□□ 0.23
Tulp3O88413 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tulp3O88413 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tulp3O88413 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tulp3O88413 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Tulp3O88413 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tulp3O88413 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.46■□□□□ 0.23
Tulp3O88413 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tulp3O88413 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tulp3O88413 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tulp3O88413 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.45■□□□□ 0.22
Tulp3O88413 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tulp3O88413 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tulp3O88413 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tulp3O88413 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tulp3O88413 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tulp3O88413 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Tulp3O88413 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tulp3O88413 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.45■□□□□ 0.22
Tulp3O88413 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.45■□□□□ 0.22
Tulp3O88413 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tulp3O88413 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tulp3O88413 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tulp3O88413 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tulp3O88413 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms