Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ubr1O70481 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ubr1O70481 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ubr1O70481 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ubr1O70481 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ubr1O70481 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ubr1O70481 Gm45141-201ENSMUST00000206502 1888 ntBASIC23.03■■□□□ 1.28
Ubr1O70481 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ubr1O70481 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ubr1O70481 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Ubr1O70481 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ubr1O70481 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ubr1O70481 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ubr1O70481 Gm19721-201ENSMUST00000195284 1764 ntBASIC23.02■■□□□ 1.28
Ubr1O70481 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC23.02■■□□□ 1.28
Ubr1O70481 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Ubr1O70481 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ubr1O70481 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.02■■□□□ 1.28
Ubr1O70481 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Ubr1O70481 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ubr1O70481 Gm11950-201ENSMUST00000121615 838 ntBASIC23.01■■□□□ 1.27
Ubr1O70481 Gm25016-201ENSMUST00000158399 131 ntBASIC23.01■■□□□ 1.27
Ubr1O70481 Gm37722-201ENSMUST00000193757 208 ntBASIC23.01■■□□□ 1.27
Ubr1O70481 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC23.01■■□□□ 1.27
Ubr1O70481 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ubr1O70481 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC23.01■■□□□ 1.27
Ubr1O70481 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ubr1O70481 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ubr1O70481 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC23.01■■□□□ 1.27
Ubr1O70481 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ubr1O70481 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Ubr1O70481 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ubr1O70481 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr1O70481 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr1O70481 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr1O70481 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC23■■□□□ 1.27
Ubr1O70481 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr1O70481 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr1O70481 Gm27704-201ENSMUST00000185094 107 ntBASIC23■■□□□ 1.27
Ubr1O70481 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Ubr1O70481 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr1O70481 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr1O70481 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ubr1O70481 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
Ubr1O70481 Gm17807-201ENSMUST00000186869 298 ntBASIC22.99■■□□□ 1.27
Ubr1O70481 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ubr1O70481 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.99■■□□□ 1.27
Ubr1O70481 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ubr1O70481 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ubr1O70481 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ubr1O70481 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ubr1O70481 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Ubr1O70481 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr1O70481 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Ubr1O70481 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr1O70481 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr1O70481 Gm27357-201ENSMUST00000183754 135 ntBASIC22.98■■□□□ 1.27
Ubr1O70481 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr1O70481 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr1O70481 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr1O70481 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr1O70481 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr1O70481 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Ubr1O70481 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ubr1O70481 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ubr1O70481 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Ubr1O70481 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ubr1O70481 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ubr1O70481 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ubr1O70481 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ubr1O70481 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Ubr1O70481 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr1O70481 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr1O70481 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr1O70481 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
Ubr1O70481 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr1O70481 Gm43272-201ENSMUST00000200599 1584 ntBASIC22.96■■□□□ 1.27
Ubr1O70481 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Ubr1O70481 Dmtn-210ENSMUST00000228824 2377 ntBASIC22.96■■□□□ 1.27
Ubr1O70481 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr1O70481 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr1O70481 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
Ubr1O70481 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
Ubr1O70481 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC22.96■■□□□ 1.27
Ubr1O70481 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr1O70481 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr1O70481 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr1O70481 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr1O70481 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubr1O70481 Mir770-201ENSMUST00000103252 94 ntBASIC22.95■■□□□ 1.26
Ubr1O70481 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Ubr1O70481 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ubr1O70481 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Ubr1O70481 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC22.95■■□□□ 1.26
Ubr1O70481 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubr1O70481 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Ubr1O70481 Fst-202ENSMUST00000223640 2612 ntBASIC22.94■■□□□ 1.26
Ubr1O70481 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Ubr1O70481 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms