Protein–RNA interactions for Protein: O70157

Top3a, DNA topoisomerase 3-alpha, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3aO70157 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Top3aO70157 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Top3aO70157 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Top3aO70157 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Top3aO70157 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.76■□□□□ 0.43
Top3aO70157 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.76■□□□□ 0.43
Top3aO70157 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Top3aO70157 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.76■□□□□ 0.43
Top3aO70157 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Top3aO70157 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Top3aO70157 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Top3aO70157 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.76■□□□□ 0.43
Top3aO70157 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Top3aO70157 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.75■□□□□ 0.43
Top3aO70157 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.75■□□□□ 0.43
Top3aO70157 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Top3aO70157 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.74■□□□□ 0.43
Top3aO70157 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.74■□□□□ 0.43
Top3aO70157 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Top3aO70157 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Top3aO70157 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Top3aO70157 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Top3aO70157 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Top3aO70157 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Top3aO70157 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Top3aO70157 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.72■□□□□ 0.43
Top3aO70157 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.72■□□□□ 0.43
Top3aO70157 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.72■□□□□ 0.43
Top3aO70157 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Top3aO70157 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Top3aO70157 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Top3aO70157 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Top3aO70157 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.72■□□□□ 0.43
Top3aO70157 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Top3aO70157 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top3aO70157 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Top3aO70157 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top3aO70157 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top3aO70157 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.71■□□□□ 0.43
Top3aO70157 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Top3aO70157 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top3aO70157 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.71■□□□□ 0.43
Top3aO70157 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Top3aO70157 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top3aO70157 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Top3aO70157 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top3aO70157 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Top3aO70157 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Top3aO70157 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top3aO70157 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms