Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.66■□□□□ 0.58
Pja1O55176 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.66■□□□□ 0.58
Pja1O55176 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.66■□□□□ 0.58
Pja1O55176 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.66■□□□□ 0.58
Pja1O55176 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pja1O55176 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pja1O55176 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.65■□□□□ 0.58
Pja1O55176 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.65■□□□□ 0.58
Pja1O55176 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.65■□□□□ 0.58
Pja1O55176 Gm7291-201ENSMUST00000199147 382 ntBASIC18.65■□□□□ 0.58
Pja1O55176 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.65■□□□□ 0.58
Pja1O55176 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pja1O55176 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.65■□□□□ 0.58
Pja1O55176 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Pja1O55176 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.65■□□□□ 0.58
Pja1O55176 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pja1O55176 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pja1O55176 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Pja1O55176 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Pja1O55176 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pja1O55176 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pja1O55176 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pja1O55176 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pja1O55176 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pja1O55176 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pja1O55176 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.64■□□□□ 0.57
Pja1O55176 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.64■□□□□ 0.57
Pja1O55176 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.64■□□□□ 0.57
Pja1O55176 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pja1O55176 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pja1O55176 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pja1O55176 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pja1O55176 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pja1O55176 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.63■□□□□ 0.57
Pja1O55176 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pja1O55176 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pja1O55176 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pja1O55176 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pja1O55176 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.63■□□□□ 0.57
Pja1O55176 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.63■□□□□ 0.57
Pja1O55176 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.63■□□□□ 0.57
Pja1O55176 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pja1O55176 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pja1O55176 Gm6365-201ENSMUST00000054711 744 ntBASIC18.63■□□□□ 0.57
Pja1O55176 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pja1O55176 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pja1O55176 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pja1O55176 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pja1O55176 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Pja1O55176 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pja1O55176 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.63■□□□□ 0.57
Pja1O55176 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pja1O55176 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pja1O55176 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pja1O55176 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pja1O55176 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pja1O55176 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pja1O55176 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.62■□□□□ 0.57
Pja1O55176 Gm29791-202ENSMUST00000207888 369 ntBASIC18.62■□□□□ 0.57
Pja1O55176 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pja1O55176 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pja1O55176 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pja1O55176 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pja1O55176 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pja1O55176 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pja1O55176 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.61■□□□□ 0.57
Pja1O55176 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pja1O55176 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pja1O55176 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Pja1O55176 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.61■□□□□ 0.57
Pja1O55176 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pja1O55176 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pja1O55176 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pja1O55176 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.61■□□□□ 0.57
Pja1O55176 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pja1O55176 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms