Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ChkaO54804 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChkaO54804 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChkaO54804 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.82■□□□□ 0.44
ChkaO54804 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.82■□□□□ 0.44
ChkaO54804 Mir5133-201ENSMUST00000174955 77 ntBASIC17.82■□□□□ 0.44
ChkaO54804 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.82■□□□□ 0.44
ChkaO54804 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.82■□□□□ 0.44
ChkaO54804 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChkaO54804 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ChkaO54804 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ChkaO54804 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChkaO54804 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ChkaO54804 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.81■□□□□ 0.44
ChkaO54804 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.81■□□□□ 0.44
ChkaO54804 Rab3c-203ENSMUST00000224180 967 ntBASIC17.81■□□□□ 0.44
ChkaO54804 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ChkaO54804 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChkaO54804 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChkaO54804 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChkaO54804 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChkaO54804 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChkaO54804 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.8■□□□□ 0.44
ChkaO54804 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.8■□□□□ 0.44
ChkaO54804 Gm29791-202ENSMUST00000207888 369 ntBASIC17.8■□□□□ 0.44
ChkaO54804 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.8■□□□□ 0.44
ChkaO54804 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChkaO54804 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChkaO54804 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChkaO54804 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChkaO54804 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.8■□□□□ 0.44
ChkaO54804 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChkaO54804 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChkaO54804 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChkaO54804 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.79■□□□□ 0.44
ChkaO54804 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ChkaO54804 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ChkaO54804 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ChkaO54804 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ChkaO54804 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.79■□□□□ 0.44
ChkaO54804 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.79■□□□□ 0.44
ChkaO54804 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChkaO54804 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ChkaO54804 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ChkaO54804 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChkaO54804 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChkaO54804 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ChkaO54804 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChkaO54804 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChkaO54804 Flg-201ENSMUST00000050758 1488 ntBASIC17.78■□□□□ 0.44
ChkaO54804 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChkaO54804 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ChkaO54804 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.78■□□□□ 0.44
ChkaO54804 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChkaO54804 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.78■□□□□ 0.44
ChkaO54804 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ChkaO54804 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.77■□□□□ 0.44
ChkaO54804 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
ChkaO54804 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ChkaO54804 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms