Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx8O35652 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx8O35652 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx8O35652 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx8O35652 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Lhx8O35652 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx8O35652 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Lhx8O35652 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx8O35652 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC17.08■□□□□ 0.32
Lhx8O35652 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC17.08■□□□□ 0.32
Lhx8O35652 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.08■□□□□ 0.32
Lhx8O35652 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx8O35652 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Lhx8O35652 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx8O35652 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx8O35652 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx8O35652 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx8O35652 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx8O35652 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx8O35652 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx8O35652 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 CT010486.3-201ENSMUST00000224555 811 ntBASIC17.07■□□□□ 0.32
Lhx8O35652 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.07■□□□□ 0.32
Lhx8O35652 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx8O35652 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Lhx8O35652 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Lhx8O35652 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.06■□□□□ 0.32
Lhx8O35652 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.06■□□□□ 0.32
Lhx8O35652 Gm6211-202ENSMUST00000167849 925 ntBASIC17.06■□□□□ 0.32
Lhx8O35652 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx8O35652 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Lhx8O35652 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx8O35652 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx8O35652 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx8O35652 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.05■□□□□ 0.32
Lhx8O35652 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lhx8O35652 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx8O35652 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx8O35652 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lhx8O35652 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx8O35652 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Lhx8O35652 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.05■□□□□ 0.32
Lhx8O35652 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.05■□□□□ 0.32
Lhx8O35652 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.05■□□□□ 0.32
Lhx8O35652 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.05■□□□□ 0.32
Lhx8O35652 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx8O35652 Gm25131-201ENSMUST00000082653 151 ntBASIC17.05■□□□□ 0.32
Lhx8O35652 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.05■□□□□ 0.32
Lhx8O35652 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Lhx8O35652 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx8O35652 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx8O35652 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lhx8O35652 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx8O35652 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx8O35652 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.04■□□□□ 0.32
Lhx8O35652 AC107452.3-201ENSMUST00000228807 1308 ntBASIC17.04■□□□□ 0.32
Lhx8O35652 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx8O35652 Gm13313-201ENSMUST00000118938 1084 ntBASIC17.04■□□□□ 0.32
Lhx8O35652 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx8O35652 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.04■□□□□ 0.32
Lhx8O35652 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Lhx8O35652 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.04■□□□□ 0.32
Lhx8O35652 Gm37055-201ENSMUST00000191866 133 ntBASIC17.04■□□□□ 0.32
Lhx8O35652 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.04■□□□□ 0.32
Lhx8O35652 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx8O35652 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx8O35652 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lhx8O35652 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx8O35652 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.04■□□□□ 0.32
Lhx8O35652 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lhx8O35652 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx8O35652 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx8O35652 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms