Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag2O35638 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Stag2O35638 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Stag2O35638 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.21■□□□□ 0.83
Stag2O35638 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.21■□□□□ 0.83
Stag2O35638 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag2O35638 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.21■□□□□ 0.83
Stag2O35638 Timm23-208ENSMUST00000226683 750 ntBASIC20.21■□□□□ 0.83
Stag2O35638 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Stag2O35638 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Stag2O35638 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.21■□□□□ 0.83
Stag2O35638 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Stag2O35638 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag2O35638 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag2O35638 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag2O35638 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Stag2O35638 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.2■□□□□ 0.82
Stag2O35638 Odf3b-204ENSMUST00000227834 930 ntBASIC20.2■□□□□ 0.82
Stag2O35638 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag2O35638 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag2O35638 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.2■□□□□ 0.82
Stag2O35638 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag2O35638 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag2O35638 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Stag2O35638 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Stag2O35638 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag2O35638 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Stag2O35638 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Stag2O35638 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.19■□□□□ 0.82
Stag2O35638 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag2O35638 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Stag2O35638 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Stag2O35638 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag2O35638 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag2O35638 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag2O35638 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag2O35638 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Stag2O35638 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Stag2O35638 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.18■□□□□ 0.82
Stag2O35638 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.18■□□□□ 0.82
Stag2O35638 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.18■□□□□ 0.82
Stag2O35638 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Stag2O35638 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Stag2O35638 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Stag2O35638 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stag2O35638 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stag2O35638 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stag2O35638 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stag2O35638 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stag2O35638 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.17■□□□□ 0.82
Stag2O35638 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.17■□□□□ 0.82
Stag2O35638 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stag2O35638 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Stag2O35638 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stag2O35638 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Stag2O35638 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Stag2O35638 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stag2O35638 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Stag2O35638 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stag2O35638 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.16■□□□□ 0.82
Stag2O35638 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Stag2O35638 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Stag2O35638 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.16■□□□□ 0.82
Stag2O35638 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stag2O35638 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.16■□□□□ 0.82
Stag2O35638 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.16■□□□□ 0.82
Stag2O35638 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.16■□□□□ 0.82
Stag2O35638 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Stag2O35638 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Stag2O35638 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stag2O35638 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stag2O35638 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stag2O35638 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Stag2O35638 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stag2O35638 Mir7071-201ENSMUST00000184847 69 ntBASIC20.15■□□□□ 0.82
Stag2O35638 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.15■□□□□ 0.82
Stag2O35638 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.15■□□□□ 0.82
Stag2O35638 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stag2O35638 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stag2O35638 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Stag2O35638 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stag2O35638 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.15■□□□□ 0.82
Stag2O35638 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stag2O35638 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.15■□□□□ 0.82
Stag2O35638 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stag2O35638 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stag2O35638 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Stag2O35638 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Stag2O35638 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms