Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Efnb3O35393 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.96□□□□□ -0.17
Efnb3O35393 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Efnb3O35393 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.96□□□□□ -0.17
Efnb3O35393 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Efnb3O35393 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Efnb3O35393 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Efnb3O35393 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Efnb3O35393 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Efnb3O35393 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Efnb3O35393 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Efnb3O35393 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Efnb3O35393 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Efnb3O35393 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Efnb3O35393 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Efnb3O35393 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.95□□□□□ -0.18
Efnb3O35393 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Efnb3O35393 Gm10493-201ENSMUST00000097270 612 ntBASIC13.95□□□□□ -0.18
Efnb3O35393 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Efnb3O35393 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Efnb3O35393 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Efnb3O35393 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.95□□□□□ -0.18
Efnb3O35393 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Efnb3O35393 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Efnb3O35393 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Efnb3O35393 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.95□□□□□ -0.18
Efnb3O35393 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Efnb3O35393 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.94□□□□□ -0.18
Efnb3O35393 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Efnb3O35393 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.94□□□□□ -0.18
Efnb3O35393 Gm22325-201ENSMUST00000158904 308 ntBASIC13.94□□□□□ -0.18
Efnb3O35393 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Efnb3O35393 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.94□□□□□ -0.18
Efnb3O35393 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Efnb3O35393 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.93□□□□□ -0.18
Efnb3O35393 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.93□□□□□ -0.18
Efnb3O35393 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.93□□□□□ -0.18
Efnb3O35393 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Gm18284-201ENSMUST00000172604 624 ntBASIC13.93□□□□□ -0.18
Efnb3O35393 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.93□□□□□ -0.18
Efnb3O35393 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.93□□□□□ -0.18
Efnb3O35393 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Efnb3O35393 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
Efnb3O35393 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Efnb3O35393 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Efnb3O35393 Gm13146-201ENSMUST00000118508 780 ntBASIC13.92□□□□□ -0.18
Efnb3O35393 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Efnb3O35393 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms