Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac1O09106 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac1O09106 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Hdac1O09106 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac1O09106 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.03■□□□□ 0.96
Hdac1O09106 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Hdac1O09106 Zfp783-201ENSMUST00000095946 670 ntBASIC21.03■□□□□ 0.96
Hdac1O09106 Haglr-201ENSMUST00000100000 2085 ntBASIC21.03■□□□□ 0.96
Hdac1O09106 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac1O09106 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac1O09106 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac1O09106 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC21.02■□□□□ 0.96
Hdac1O09106 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac1O09106 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac1O09106 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.02■□□□□ 0.96
Hdac1O09106 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.02■□□□□ 0.96
Hdac1O09106 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac1O09106 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac1O09106 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac1O09106 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hdac1O09106 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hdac1O09106 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac1O09106 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac1O09106 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac1O09106 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac1O09106 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.01■□□□□ 0.95
Hdac1O09106 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac1O09106 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac1O09106 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.01■□□□□ 0.95
Hdac1O09106 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac1O09106 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac1O09106 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Hdac1O09106 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Hdac1O09106 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac1O09106 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hdac1O09106 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac1O09106 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21■□□□□ 0.95
Hdac1O09106 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac1O09106 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac1O09106 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hdac1O09106 Gm2399-201ENSMUST00000104944 225 ntBASIC21■□□□□ 0.95
Hdac1O09106 Gm18671-201ENSMUST00000214826 683 ntBASIC21■□□□□ 0.95
Hdac1O09106 Gm6365-201ENSMUST00000054711 744 ntBASIC21■□□□□ 0.95
Hdac1O09106 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac1O09106 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hdac1O09106 Gm16401-202ENSMUST00000197463 2074 ntBASIC21■□□□□ 0.95
Hdac1O09106 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hdac1O09106 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac1O09106 Gm10418-201ENSMUST00000100943 576 ntBASIC20.99■□□□□ 0.95
Hdac1O09106 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac1O09106 Mir2861-201ENSMUST00000175539 82 ntBASIC20.99■□□□□ 0.95
Hdac1O09106 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.99■□□□□ 0.95
Hdac1O09106 Gm42642-201ENSMUST00000200683 355 ntBASIC20.99■□□□□ 0.95
Hdac1O09106 AV356131-201ENSMUST00000206201 750 ntBASIC20.99■□□□□ 0.95
Hdac1O09106 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
Hdac1O09106 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.99■□□□□ 0.95
Hdac1O09106 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac1O09106 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac1O09106 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.99■□□□□ 0.95
Hdac1O09106 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac1O09106 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac1O09106 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac1O09106 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac1O09106 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Hdac1O09106 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.98■□□□□ 0.95
Hdac1O09106 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.98■□□□□ 0.95
Hdac1O09106 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Hdac1O09106 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Hdac1O09106 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac1O09106 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hdac1O09106 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hdac1O09106 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.97■□□□□ 0.95
Hdac1O09106 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hdac1O09106 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hdac1O09106 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Hdac1O09106 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hdac1O09106 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hdac1O09106 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hdac1O09106 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac1O09106 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac1O09106 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Hdac1O09106 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac1O09106 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac1O09106 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Hdac1O09106 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac1O09106 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.96■□□□□ 0.95
Hdac1O09106 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms