Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.22□□□□□ -0.61
Pkd1O08852 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pkd1O08852 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.21□□□□□ -0.61
Pkd1O08852 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pkd1O08852 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pkd1O08852 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pkd1O08852 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pkd1O08852 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pkd1O08852 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pkd1O08852 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pkd1O08852 Gm10418-201ENSMUST00000100943 576 ntBASIC11.21□□□□□ -0.61
Pkd1O08852 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pkd1O08852 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.21□□□□□ -0.61
Pkd1O08852 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.21□□□□□ -0.61
Pkd1O08852 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Pkd1O08852 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pkd1O08852 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pkd1O08852 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Pkd1O08852 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pkd1O08852 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pkd1O08852 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pkd1O08852 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pkd1O08852 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Pkd1O08852 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.21□□□□□ -0.62
Pkd1O08852 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pkd1O08852 Tgds-204ENSMUST00000228543 1594 ntBASIC11.21□□□□□ -0.62
Pkd1O08852 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Pkd1O08852 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pkd1O08852 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.21□□□□□ -0.62
Pkd1O08852 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pkd1O08852 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pkd1O08852 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pkd1O08852 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pkd1O08852 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pkd1O08852 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pkd1O08852 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pkd1O08852 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.2□□□□□ -0.62
Pkd1O08852 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pkd1O08852 Gm37025-201ENSMUST00000195159 829 ntBASIC11.2□□□□□ -0.62
Pkd1O08852 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.2□□□□□ -0.62
Pkd1O08852 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.2□□□□□ -0.62
Pkd1O08852 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pkd1O08852 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC11.2□□□□□ -0.62
Pkd1O08852 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pkd1O08852 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pkd1O08852 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC11.2□□□□□ -0.62
Pkd1O08852 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Pkd1O08852 Gm18195-201ENSMUST00000207604 706 ntBASIC11.2□□□□□ -0.62
Pkd1O08852 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pkd1O08852 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.19□□□□□ -0.62
Pkd1O08852 Gm18733-201ENSMUST00000173950 856 ntBASIC11.19□□□□□ -0.62
Pkd1O08852 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Pkd1O08852 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.19□□□□□ -0.62
Pkd1O08852 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pkd1O08852 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.19□□□□□ -0.62
Pkd1O08852 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.19□□□□□ -0.62
Pkd1O08852 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.19□□□□□ -0.62
Pkd1O08852 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pkd1O08852 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pkd1O08852 Gm12895-201ENSMUST00000122214 226 ntBASIC11.18□□□□□ -0.62
Pkd1O08852 Gm11452-201ENSMUST00000122376 690 ntBASIC11.18□□□□□ -0.62
Pkd1O08852 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pkd1O08852 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.18□□□□□ -0.62
Pkd1O08852 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pkd1O08852 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pkd1O08852 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pkd1O08852 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pkd1O08852 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pkd1O08852 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pkd1O08852 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pkd1O08852 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pkd1O08852 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pkd1O08852 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pkd1O08852 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms