Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trove2O08848 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trove2O08848 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trove2O08848 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trove2O08848 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trove2O08848 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trove2O08848 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trove2O08848 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trove2O08848 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trove2O08848 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trove2O08848 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trove2O08848 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trove2O08848 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Trove2O08848 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trove2O08848 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.1■□□□□ 0.49
Trove2O08848 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.1■□□□□ 0.49
Trove2O08848 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Trove2O08848 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trove2O08848 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trove2O08848 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Trove2O08848 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trove2O08848 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trove2O08848 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trove2O08848 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.1■□□□□ 0.49
Trove2O08848 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trove2O08848 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trove2O08848 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trove2O08848 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trove2O08848 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trove2O08848 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trove2O08848 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Trove2O08848 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trove2O08848 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trove2O08848 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trove2O08848 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trove2O08848 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trove2O08848 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trove2O08848 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.09■□□□□ 0.49
Trove2O08848 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Trove2O08848 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.09■□□□□ 0.49
Trove2O08848 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Trove2O08848 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trove2O08848 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.08■□□□□ 0.49
Trove2O08848 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trove2O08848 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trove2O08848 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trove2O08848 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.08■□□□□ 0.49
Trove2O08848 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trove2O08848 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.08■□□□□ 0.49
Trove2O08848 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trove2O08848 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trove2O08848 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.08■□□□□ 0.48
Trove2O08848 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trove2O08848 Gm5874-201ENSMUST00000096101 508 ntBASIC18.08■□□□□ 0.48
Trove2O08848 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trove2O08848 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.08■□□□□ 0.48
Trove2O08848 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trove2O08848 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trove2O08848 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trove2O08848 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trove2O08848 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trove2O08848 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trove2O08848 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trove2O08848 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trove2O08848 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.07■□□□□ 0.48
Trove2O08848 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Trove2O08848 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trove2O08848 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trove2O08848 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.06■□□□□ 0.48
Trove2O08848 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trove2O08848 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 Gm18671-201ENSMUST00000214826 683 ntBASIC18.06■□□□□ 0.48
Trove2O08848 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trove2O08848 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trove2O08848 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms