Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34bJ3QNR8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34bJ3QNR8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Trim34bJ3QNR8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34bJ3QNR8 Gm18032-201ENSMUST00000222541 538 ntBASIC21.59■■□□□ 1.05
Trim34bJ3QNR8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34bJ3QNR8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34bJ3QNR8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34bJ3QNR8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34bJ3QNR8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Gm10013-201ENSMUST00000106074 672 ntBASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34bJ3QNR8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trim34bJ3QNR8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trim34bJ3QNR8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim34bJ3QNR8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim34bJ3QNR8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Gm7791-201ENSMUST00000219066 539 ntBASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34bJ3QNR8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Fst-202ENSMUST00000223640 2612 ntBASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Trim34bJ3QNR8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34bJ3QNR8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34bJ3QNR8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms