Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Trmt13-210ENSMUST00000198454 880 ntBASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-3J3QMG8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13d-3J3QMG8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13d-3J3QMG8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13d-3J3QMG8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13d-3J3QMG8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13d-3J3QMG8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-3J3QMG8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Gm13401-201ENSMUST00000117074 291 ntBASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-3J3QMG8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav13d-3J3QMG8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-3J3QMG8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms