Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syngap1F6SEU4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syngap1F6SEU4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Syngap1F6SEU4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syngap1F6SEU4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syngap1F6SEU4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syngap1F6SEU4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syngap1F6SEU4 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.76■□□□□ 0.75
Syngap1F6SEU4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Mir6349-201ENSMUST00000184059 97 ntBASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syngap1F6SEU4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syngap1F6SEU4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syngap1F6SEU4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syngap1F6SEU4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syngap1F6SEU4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syngap1F6SEU4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Syngap1F6SEU4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Syngap1F6SEU4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.74■□□□□ 0.75
Syngap1F6SEU4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syngap1F6SEU4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Syngap1F6SEU4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syngap1F6SEU4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syngap1F6SEU4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Syngap1F6SEU4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syngap1F6SEU4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syngap1F6SEU4 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.71■□□□□ 0.75
Syngap1F6SEU4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syngap1F6SEU4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Syngap1F6SEU4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Syngap1F6SEU4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syngap1F6SEU4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Syngap1F6SEU4 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.71■□□□□ 0.75
Syngap1F6SEU4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Syngap1F6SEU4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.71■□□□□ 0.75
Syngap1F6SEU4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Mir5130-201ENSMUST00000175160 84 ntBASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.7■□□□□ 0.74
Syngap1F6SEU4 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.7■□□□□ 0.74
Syngap1F6SEU4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.7■□□□□ 0.74
Syngap1F6SEU4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Syngap1F6SEU4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms