Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm28659-201ENSMUST00000188013 759 ntBASIC24.85■■□□□ 1.57
Hfm1D3Z4R1 Gm6443-201ENSMUST00000203599 874 ntBASIC24.85■■□□□ 1.57
Hfm1D3Z4R1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Hfm1D3Z4R1 Notumos-201ENSMUST00000151998 2659 ntBASIC24.85■■□□□ 1.57
Hfm1D3Z4R1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
Hfm1D3Z4R1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Hfm1D3Z4R1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC24.84■■□□□ 1.57
Hfm1D3Z4R1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
Hfm1D3Z4R1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Hfm1D3Z4R1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Hfm1D3Z4R1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Hfm1D3Z4R1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
Hfm1D3Z4R1 Gm25925-201ENSMUST00000158314 306 ntBASIC24.82■■□□□ 1.56
Hfm1D3Z4R1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Hfm1D3Z4R1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Hfm1D3Z4R1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC24.82■■□□□ 1.56
Hfm1D3Z4R1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Hfm1D3Z4R1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Hfm1D3Z4R1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Hfm1D3Z4R1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Hfm1D3Z4R1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 Mir8098-201ENSMUST00000184011 137 ntBASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 Gm5867-201ENSMUST00000063197 592 ntBASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hfm1D3Z4R1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Hfm1D3Z4R1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC24.8■■□□□ 1.56
Hfm1D3Z4R1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Hfm1D3Z4R1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC24.8■■□□□ 1.56
Hfm1D3Z4R1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Hfm1D3Z4R1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Hfm1D3Z4R1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Hfm1D3Z4R1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Hfm1D3Z4R1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Hfm1D3Z4R1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Hfm1D3Z4R1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Hfm1D3Z4R1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Hfm1D3Z4R1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC24.78■■□□□ 1.56
Hfm1D3Z4R1 AC124569.2-201ENSMUST00000225998 818 ntBASIC24.78■■□□□ 1.56
Hfm1D3Z4R1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Hfm1D3Z4R1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Hfm1D3Z4R1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC24.78■■□□□ 1.56
Hfm1D3Z4R1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Hfm1D3Z4R1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Hfm1D3Z4R1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Hfm1D3Z4R1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Hfm1D3Z4R1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Hfm1D3Z4R1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC24.76■■□□□ 1.55
Hfm1D3Z4R1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Hfm1D3Z4R1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms