Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Gm4968-201ENSMUST00000071458 858 ntBASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim30cD3YVI9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim30cD3YVI9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Trim30cD3YVI9 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.26■□□□□ 0.67
Trim30cD3YVI9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30cD3YVI9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim30cD3YVI9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30cD3YVI9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30cD3YVI9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30cD3YVI9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Trim30cD3YVI9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30cD3YVI9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30cD3YVI9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30cD3YVI9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30cD3YVI9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30cD3YVI9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30cD3YVI9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.25■□□□□ 0.67
Trim30cD3YVI9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30cD3YVI9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30cD3YVI9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim30cD3YVI9 Gm12441-201ENSMUST00000121806 588 ntBASIC19.25■□□□□ 0.67
Trim30cD3YVI9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.25■□□□□ 0.67
Trim30cD3YVI9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim30cD3YVI9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30cD3YVI9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30cD3YVI9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim30cD3YVI9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30cD3YVI9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30cD3YVI9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Gm26524-201ENSMUST00000192339 390 ntBASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30cD3YVI9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim30cD3YVI9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim30cD3YVI9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms