Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gm5643-201ENSMUST00000117081 966 ntBASIC18.68■□□□□ 0.58
Rfx8D3YU81 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx8D3YU81 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.68■□□□□ 0.58
Rfx8D3YU81 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.68■□□□□ 0.58
Rfx8D3YU81 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx8D3YU81 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx8D3YU81 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx8D3YU81 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx8D3YU81 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx8D3YU81 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx8D3YU81 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Gm10418-201ENSMUST00000100943 576 ntBASIC18.67■□□□□ 0.58
Rfx8D3YU81 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx8D3YU81 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.67■□□□□ 0.58
Rfx8D3YU81 Gm27011-201ENSMUST00000182352 972 ntBASIC18.67■□□□□ 0.58
Rfx8D3YU81 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.67■□□□□ 0.58
Rfx8D3YU81 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfx8D3YU81 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx8D3YU81 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.66■□□□□ 0.58
Rfx8D3YU81 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx8D3YU81 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx8D3YU81 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rfx8D3YU81 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx8D3YU81 Gm13168-201ENSMUST00000121771 632 ntBASIC18.66■□□□□ 0.58
Rfx8D3YU81 Mir2861-201ENSMUST00000175539 82 ntBASIC18.66■□□□□ 0.58
Rfx8D3YU81 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Rfx8D3YU81 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx8D3YU81 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx8D3YU81 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx8D3YU81 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx8D3YU81 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.65■□□□□ 0.58
Rfx8D3YU81 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx8D3YU81 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx8D3YU81 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx8D3YU81 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx8D3YU81 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.64■□□□□ 0.57
Rfx8D3YU81 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx8D3YU81 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx8D3YU81 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx8D3YU81 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx8D3YU81 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rfx8D3YU81 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rfx8D3YU81 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx8D3YU81 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.64■□□□□ 0.57
Rfx8D3YU81 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx8D3YU81 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Rfx8D3YU81 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.63■□□□□ 0.57
Rfx8D3YU81 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx8D3YU81 Gm15378-201ENSMUST00000121894 207 ntBASIC18.62■□□□□ 0.57
Rfx8D3YU81 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx8D3YU81 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx8D3YU81 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx8D3YU81 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx8D3YU81 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rfx8D3YU81 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.62■□□□□ 0.57
Rfx8D3YU81 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms