Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Idnk-204ENSMUST00000226010 1898 ntBASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Haglr-201ENSMUST00000100000 2085 ntBASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Gm45102-201ENSMUST00000207427 857 ntBASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm12887B1AVM1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.31□□□□□ -0.12
Gm12887B1AVM1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm12887B1AVM1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Rps24-207ENSMUST00000224568 714 ntBASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm12887B1AVM1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm12887B1AVM1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm12887B1AVM1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gm12887B1AVM1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm12887B1AVM1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms