Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Timm23-208ENSMUST00000226683 750 ntBASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4bA6X942 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d4bA6X942 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Rarb-207ENSMUST00000225921 2756 ntBASIC18.86■□□□□ 0.61
Sh2d4bA6X942 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d4bA6X942 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Gm18025-201ENSMUST00000221733 862 ntBASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh2d4bA6X942 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Gm10517-202ENSMUST00000192970 758 ntBASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d4bA6X942 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d4bA6X942 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d4bA6X942 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d4bA6X942 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d4bA6X942 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms