Protein–RNA interactions for Protein: A2A8L1

Chd5, Chromodomain-helicase-DNA-binding protein 5, mousemouse

Predictions only

Length 1,946 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd5A2A8L1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.6■□□□□ 0.89
Chd5A2A8L1 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.6■□□□□ 0.89
Chd5A2A8L1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd5A2A8L1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Chd5A2A8L1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd5A2A8L1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd5A2A8L1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd5A2A8L1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd5A2A8L1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd5A2A8L1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd5A2A8L1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Chd5A2A8L1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd5A2A8L1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd5A2A8L1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Chd5A2A8L1 Gm7213-201ENSMUST00000215977 950 ntBASIC20.57■□□□□ 0.88
Chd5A2A8L1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Actl10-202ENSMUST00000226583 1501 ntBASIC20.56■□□□□ 0.88
Chd5A2A8L1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Gm17971-201ENSMUST00000190239 806 ntBASIC20.56■□□□□ 0.88
Chd5A2A8L1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd5A2A8L1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.55■□□□□ 0.88
Chd5A2A8L1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd5A2A8L1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd5A2A8L1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd5A2A8L1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd5A2A8L1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd5A2A8L1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Chd5A2A8L1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd5A2A8L1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd5A2A8L1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd5A2A8L1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd5A2A8L1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd5A2A8L1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Chd5A2A8L1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd5A2A8L1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd5A2A8L1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Chd5A2A8L1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd5A2A8L1 Gm27741-201ENSMUST00000185060 237 ntBASIC20.53■□□□□ 0.88
Chd5A2A8L1 Gm21559-201ENSMUST00000220638 855 ntBASIC20.53■□□□□ 0.88
Chd5A2A8L1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd5A2A8L1 Gm8587-201ENSMUST00000076538 843 ntBASIC20.53■□□□□ 0.88
Chd5A2A8L1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd5A2A8L1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd5A2A8L1 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.53■□□□□ 0.88
Chd5A2A8L1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd5A2A8L1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Chd5A2A8L1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Chd5A2A8L1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd5A2A8L1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms