Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 Tgds-204ENSMUST00000228543 1594 ntBASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 Gm14859-201ENSMUST00000117752 357 ntBASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gm3854A0A1B0GSS6 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3854A0A1B0GSS6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3854A0A1B0GSS6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Gm3854A0A1B0GSS6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm3854A0A1B0GSS6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm3854A0A1B0GSS6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm13474-201ENSMUST00000122466 815 ntBASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm25016-201ENSMUST00000158399 131 ntBASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm29791-202ENSMUST00000207888 369 ntBASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Iqck-206ENSMUST00000208658 2891 ntBASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3854A0A1B0GSS6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3854A0A1B0GSS6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3854A0A1B0GSS6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms