Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-5A0A140T8M6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-5A0A140T8M6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.15□□□□□ -0.62
Igkv3-5A0A140T8M6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Igkv3-5A0A140T8M6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-5A0A140T8M6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-5A0A140T8M6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.15□□□□□ -0.62
Igkv3-5A0A140T8M6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-5A0A140T8M6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-5A0A140T8M6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC11.15□□□□□ -0.62
Igkv3-5A0A140T8M6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
Igkv3-5A0A140T8M6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv3-5A0A140T8M6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv3-5A0A140T8M6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-5A0A140T8M6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC11.13□□□□□ -0.63
Igkv3-5A0A140T8M6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-5A0A140T8M6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-5A0A140T8M6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-5A0A140T8M6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC11.13□□□□□ -0.63
Igkv3-5A0A140T8M6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm37805-201ENSMUST00000192612 1094 ntBASIC11.13□□□□□ -0.63
Igkv3-5A0A140T8M6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-5A0A140T8M6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-5A0A140T8M6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-5A0A140T8M6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Igkv3-5A0A140T8M6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm42939-201ENSMUST00000197514 2205 ntBASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-5A0A140T8M6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 AC107452.1-201ENSMUST00000227963 481 ntBASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-5A0A140T8M6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms