Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Gm7514-201ENSMUST00000209475 934 ntBASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv29A0A0G2LB96 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv29A0A0G2LB96 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv29A0A0G2LB96 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv29A0A0G2LB96 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv29A0A0G2LB96 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms