Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Rps24-207ENSMUST00000224568 714 ntBASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv20A0A0B4J1H5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv20A0A0B4J1H5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv20A0A0B4J1H5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv20A0A0B4J1H5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv20A0A0B4J1H5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv20A0A0B4J1H5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv20A0A0B4J1H5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Gm22325-201ENSMUST00000158904 308 ntBASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Gm43173-201ENSMUST00000202246 593 ntBASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv20A0A0B4J1H5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv20A0A0B4J1H5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv20A0A0B4J1H5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Mir7075-201ENSMUST00000184187 82 ntBASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms