Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.22□□□□□ -0.13
Trbv5A0A0B4J1G9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm14117-201ENSMUST00000122417 843 ntBASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv5A0A0B4J1G9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv5A0A0B4J1G9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv5A0A0B4J1G9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv5A0A0B4J1G9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv5A0A0B4J1G9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv5A0A0B4J1G9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv5A0A0B4J1G9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv5A0A0B4J1G9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Idnk-204ENSMUST00000226010 1898 ntBASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv5A0A0B4J1G9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv5A0A0B4J1G9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms