Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.62■□□□□ 0.09
Sirpb1bA0A0A6YXN8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.62■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1bA0A0A6YXN8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.62■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Mir6982-201ENSMUST00000184354 68 ntBASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Gm27275-201ENSMUST00000184318 272 ntBASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sirpb1bA0A0A6YXN8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sirpb1bA0A0A6YXN8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1bA0A0A6YXN8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms