Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Trbc1A0A0A6YWV4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trbc1A0A0A6YWV4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbc1A0A0A6YWV4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbc1A0A0A6YWV4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trbc1A0A0A6YWV4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trbc1A0A0A6YWV4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Mtag2-201ENSMUST00000058665 714 ntBASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbc1A0A0A6YWV4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.19■□□□□ 0.18
Trbc1A0A0A6YWV4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbc1A0A0A6YWV4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Gm10812-201ENSMUST00000099864 546 ntBASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Tgds-204ENSMUST00000228543 1594 ntBASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbc1A0A0A6YWV4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Gm15378-201ENSMUST00000121894 207 ntBASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Mir6349-201ENSMUST00000184059 97 ntBASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms