Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms