Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Gm10418-201ENSMUST00000100943 576 ntBASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Gm15375-201ENSMUST00000119510 849 ntBASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Gm10653-202ENSMUST00000139570 835 ntBASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-4A0A075B6B4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-4A0A075B6B4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-4A0A075B6B4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-4A0A075B6B4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-4A0A075B6B4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Trav6-4A0A075B6B4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav6-4A0A075B6B4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-4A0A075B6B4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-4A0A075B6B4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-4A0A075B6B4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trav6-4A0A075B6B4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-4A0A075B6B4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-4A0A075B6B4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms