Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12d-3A0A075B6A4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12d-3A0A075B6A4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm11175-201ENSMUST00000116172 543 ntBASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav12d-3A0A075B6A4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-3A0A075B6A4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms