Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav18A0A075B656 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav18A0A075B656 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Gm26571-201ENSMUST00000181399 666 ntBASIC14.47□□□□□ -0.09
Trav18A0A075B656 Gm7291-201ENSMUST00000199147 382 ntBASIC14.47□□□□□ -0.09
Trav18A0A075B656 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.47□□□□□ -0.09
Trav18A0A075B656 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav18A0A075B656 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav18A0A075B656 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav18A0A075B656 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav18A0A075B656 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav18A0A075B656 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav18A0A075B656 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav18A0A075B656 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav18A0A075B656 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav18A0A075B656 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav18A0A075B656 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav18A0A075B656 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav18A0A075B656 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav18A0A075B656 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav18A0A075B656 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav18A0A075B656 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trav18A0A075B656 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav18A0A075B656 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav18A0A075B656 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav18A0A075B656 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav18A0A075B656 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Gm6211-202ENSMUST00000167849 925 ntBASIC14.43□□□□□ -0.1
Trav18A0A075B656 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.43□□□□□ -0.1
Trav18A0A075B656 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.43□□□□□ -0.1
Trav18A0A075B656 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.43□□□□□ -0.1
Trav18A0A075B656 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav18A0A075B656 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms