Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Gm14117-201ENSMUST00000122417 843 ntBASIC14□□□□□ -0.17
Trav4-2A0A075B638 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Gm9847-201ENSMUST00000052528 599 ntBASIC14□□□□□ -0.17
Trav4-2A0A075B638 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-2A0A075B638 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Gm43173-201ENSMUST00000202246 593 ntBASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav4-2A0A075B638 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Rps24-207ENSMUST00000224568 714 ntBASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-2A0A075B638 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms