Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Gm5874-201ENSMUST00000096101 508 ntBASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9n-4A0A075B631 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9n-4A0A075B631 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-4A0A075B631 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-4A0A075B631 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-4A0A075B631 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-4A0A075B631 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-4A0A075B631 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav9n-4A0A075B631 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav9n-4A0A075B631 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav9n-4A0A075B631 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-4A0A075B631 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav9n-4A0A075B631 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-4A0A075B631 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 AV356131-201ENSMUST00000206201 750 ntBASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-4A0A075B631 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms