Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Spcs1-204ENSMUST00000226782 949 ntBASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.99□□□□□ -0.33
Trav16d-dv11A0A075B617 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16d-dv11A0A075B617 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Haglr-201ENSMUST00000100000 2085 ntBASIC12.97□□□□□ -0.33
Trav16d-dv11A0A075B617 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms