Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4n-4A0A075B615 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trav4n-4A0A075B615 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav4n-4A0A075B615 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4n-4A0A075B615 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4n-4A0A075B615 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4n-4A0A075B615 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Trav4n-4A0A075B615 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4n-4A0A075B615 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav4n-4A0A075B615 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4n-4A0A075B615 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4n-4A0A075B615 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Gm7860-201ENSMUST00000121190 879 ntBASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4n-4A0A075B615 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Gm5067-201ENSMUST00000170449 1009 ntBASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav4n-4A0A075B615 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4n-4A0A075B615 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4n-4A0A075B615 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4n-4A0A075B615 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4n-4A0A075B615 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4n-4A0A075B615 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4n-4A0A075B615 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4n-4A0A075B615 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4n-4A0A075B615 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4n-4A0A075B615 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav4n-4A0A075B615 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4n-4A0A075B615 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4n-4A0A075B615 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms