Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-6A0A075B603 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Gm9988-201ENSMUST00000069786 435 ntBASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-6A0A075B603 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-6A0A075B603 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-6A0A075B603 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-6A0A075B603 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms