Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Mir486-201ENSMUST00000093576 128 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm43490-201ENSMUST00000197593 2652 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm3978-201ENSMUST00000163406 2512 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm44610-201ENSMUST00000209012 3827 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm42576-201ENSMUST00000202336 2846 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm37767-201ENSMUST00000193239 1834 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Pcdhga1-202ENSMUST00000194888 3247 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm11207-201ENSMUST00000117824 414 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm15362-201ENSMUST00000121459 388 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm11645-201ENSMUST00000121589 649 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm23822-201ENSMUST00000158739 128 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm25615-201ENSMUST00000177836 94 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm26729-201ENSMUST00000180744 352 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm21673-201ENSMUST00000186640 436 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm29603-201ENSMUST00000186792 334 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm21135-201ENSMUST00000189023 436 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm29435-201ENSMUST00000191310 689 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 0610005C13Rik-211ENSMUST00000211530 402 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim35Q8C006 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 CT033774.2-201ENSMUST00000222079 256 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 AC154834.1-201ENSMUST00000224697 358 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 AC159205.4-201ENSMUST00000225964 704 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 AC126691.2-201ENSMUST00000226185 249 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm22950-201ENSMUST00000082776 107 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 AC124586.1-201ENSMUST00000221673 2795 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm43719-201ENSMUST00000200088 2199 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm9874-202ENSMUST00000194957 1464 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Gm13477-201ENSMUST00000121620 2687 ntBASIC8.05□□□□□ -1.12
Trim35Q8C006 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim35Q8C006 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.05□□□□□ -1.12
Trim35Q8C006 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm37192-201ENSMUST00000194479 1348 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Clca2-201ENSMUST00000040465 3986 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm36251-201ENSMUST00000213712 1914 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 AC164567.3-201ENSMUST00000217743 2869 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm7785-201ENSMUST00000117121 892 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm12954-201ENSMUST00000118610 611 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm11975-201ENSMUST00000118772 481 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Defa-ps3-201ENSMUST00000142705 282 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms