Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm2446-201ENSMUST00000220144 772 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd9P28357 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 AC154335.1-201ENSMUST00000224744 395 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxd9P28357 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm24888-201ENSMUST00000104387 130 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm11346-201ENSMUST00000118346 704 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm15621-201ENSMUST00000119162 364 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm12891-201ENSMUST00000119358 240 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm12189-201ENSMUST00000119779 912 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm11504-201ENSMUST00000120211 173 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm15786-201ENSMUST00000121079 450 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm11341-201ENSMUST00000122316 447 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Mir1953-201ENSMUST00000157866 89 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm25550-201ENSMUST00000158079 128 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm26177-201ENSMUST00000178683 107 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm33973-201ENSMUST00000195148 534 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm44403-201ENSMUST00000198554 129 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hoxd9P28357 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm26225-201ENSMUST00000082508 135 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm26056-201ENSMUST00000083043 104 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm17165-201ENSMUST00000096155 493 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hoxd9P28357 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.16□□□□□ -1.42
Hoxd9P28357 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd9P28357 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd9P28357 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.15□□□□□ -1.42
Hoxd9P28357 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd9P28357 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd9P28357 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.15□□□□□ -1.42
Hoxd9P28357 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hoxd9P28357 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd9P28357 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd9P28357 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd9P28357 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd9P28357 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd9P28357 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd9P28357 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd9P28357 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms