Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Col1a1P11087 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col1a1P11087 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.53□□□□□ -1.52
Col1a1P11087 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.52
Col1a1P11087 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col1a1P11087 Gm11631-201ENSMUST00000119220 156 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Gm14500-201ENSMUST00000121647 113 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Gm24477-201ENSMUST00000157438 103 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col1a1P11087 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col1a1P11087 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.52□□□□□ -1.53
Col1a1P11087 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col1a1P11087 Gm11394-201ENSMUST00000181421 517 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col1a1P11087 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Mir383-201ENSMUST00000083523 70 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Col1a1P11087 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col1a1P11087 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col1a1P11087 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Col1a1P11087 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col1a1P11087 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.52□□□□□ -1.53
Col1a1P11087 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col1a1P11087 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col1a1P11087 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Zfp389-201ENSMUST00000118425 675 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm37272-201ENSMUST00000193401 488 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm43828-201ENSMUST00000196890 639 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm4501-201ENSMUST00000207330 551 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Gm4558-201ENSMUST00000207886 521 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.51□□□□□ -1.53
Col1a1P11087 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col1a1P11087 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Gm26367-201ENSMUST00000104165 132 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Gm13973-201ENSMUST00000121371 894 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm24224-201ENSMUST00000158828 258 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Mir5134-201ENSMUST00000175529 78 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Gm5473-201ENSMUST00000179326 642 ntBASIC5.51□□□□□ -1.53
Col1a1P11087 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col1a1P11087 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col1a1P11087 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.51□□□□□ -1.53
Col1a1P11087 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col1a1P11087 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col1a1P11087 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col1a1P11087 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col1a1P11087 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Col1a1P11087 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms